广东畜牧兽医科技 ›› 2025, Vol. 50 ›› Issue (4): 94-104.DOI: 10.19978/j.cnki.xmsy.2025.04.15

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一株鹅源细小病毒的分离鉴定与遗传进化分析

彭珊1,王超1,朱婉君2,张济培1,陈济铛1*   

  1. (1.佛山大学动物科技学院,广东佛山528225;2.佛山天牧生物科技有限公司,广东佛山528225)
  • 出版日期:2025-08-18 发布日期:2025-08-18
  • 通讯作者: 陈济铛
  • 基金资助:
    广东省普通高校科研项目重点领域专项(2020ZDZX1018);佛山天牧生物科技有限公司技术开发项目(KH22275):佛山万牧洲生物科技有限公司技术开发项目(KH23279)

Isolation,Identification,and Genetic Evolutionary Analysis of a Goose Parvovirus Strain

PENG shan1WANG chao1ZHU Wanjun2ZHANG Jipei1CHEN Jidang1*   

  1. 1.School of Animal Science and Technology,Foshan University,Foshan Guangdong 528225;
    2.Foshan Tianmu Biotechnology Co. Ltd,Foshan Guangdong 528225
  • Online:2025-08-18 Published:2025-08-18

摘要: 小鹅瘟是由鹅细小病毒(Goose parvovirus,GPV)引发的传染病,20日龄内雏鹅具有 高致死性,而青年鹅常表现为隐性感染,易被忽视。2024年11月,广东揭阳某地养鹅场青年 鹅群(56日龄)急性发病,为明确病因,针对送检的病死鹅进行剖检并无菌采集肝、脾和肠组织 样本,通过PCR/RT?PCR方法对常见鹅病毒性传染病病原核酸进行检测。将GPV阳性组织样 本研磨处理后接种至鹅胚,随后对PCR阳性尿囊液样本进行全基因组克隆测序,并基于获得 的序列数据开展系统发育与分子进化分析。结果显示,送检组织样品中鹅细小病毒核酸呈阳 性,鹅圆环病毒(Goose circovirus,GoCV)、鹅星状病毒(Goose astrovirus,GoAstV)、新城疫病毒 (Newcastle Disease Virus,NDV)和坦布苏病毒(Tembusu virus,TMUV)核酸均为阴性。阳性病 料组织悬液接种鹅胚后,鹅胚死亡且胚体严重出血,鹅胚尿囊液PCR检测为GPV阳性。测序 结果显示,毒株基因组全长为5 028 bp,由ITR区域和NS、VP基因构成,将该毒株命名为GPV/ GD/3121/2024株。相似性分析显示,该分离株与DY16株的NS1和VP1基因相似性最高,分别 达到99.4%和95.9%。GPV/GD/3121/2024株与国内近年GPV分离株(DY16株、RC16株和HB? 2019株)全基因序列相似性高达97.5%。基于全基因组序列、非结构蛋白NS1和结构蛋白VP1 序列的遗传演化分析均显示,分离株与欧洲疫苗株(VG32/1)、中国大陆疫苗株(GDaGPV、 SYG61v)和台湾疫苗株(82?0321V)均同属一个大分支,遗传关系较近。此外,与经典GPV毒株 相比,GPV/GD/3121/2024株VP1基因含有3个特有的碱基突变位点,分别为A2496T、G2515C、 A2772G,这些突变导致VP1结构蛋白发生V38L、S178T和Y491H氨基酸位点改变。该研究确 定了该场青年鹅发病致死系感染GPV所致,并对毒株进行分离鉴定和遗传进化分析,同时简 要比较了国内GPV的分子特征,为该病毒的生物学特性研究和科学防控提供了参考信息。

关键词: 鹅细小病毒, 全基因, 遗传进化分析, 氨基酸序列比对

Abstract: Goose parvovirus(GPV)is the causative agent of Gosling plague,a highly lethal infectious disease in goslings under 20 days of age,while juvenile geese often exhibit subclinical infections that are frequently overlooked. In November 2024,an acute outbreak occurred in a flock of juvenile geese(56 days old)at a goose farm in Jieyang, Guangdong Province. To identify the cause of the disease,standard necropsy procedures were conducted on the submitted dead geese,and hepatic,splenic,and intestinal tissue samples were aseptically collected. Pathogen nucleic acids of common viral infectious diseases in geese were detected using PCR/RT⁃PCR assays. The GPV⁃positive tissue samples homogenized and inoculated into goose embryos. Subsequently,PCR⁃positive allantois fluid samples were subjected to full⁃genome cloning and sequencing,followed by phylogenetic and molecular evolutionary analysis based on the obtained sequence data. The results indicated that the submitted tissue samples tested positive for goose parvovirus(GPV)nucleic acid by PCR,while showing negative results for goose circovirus(GoCV),goose astrovirus (GoAstV),Newcastle disease virus(NDV),and Tembusu virus(TMUV). After inoculation of the GPV⁃positive tissue homogenate into goose embryos,embryo death with severe hemorrhage was observed,and subsequent PCR testing confirmed GPV positivity in the allantois fluid. Genome sequencing revealed that the viral strain possesses a complete genome of 5 028 bp,consisting of inverted terminal repeat(ITR)regions along with non⁃structural(NS)and capsid(VP)genes. The strain was designated as GPV/GD/3121/2024. Similarity analysis showed that this isolated strain had the highest similarity to the DY16 strain in both the NS1 gene(99.4%)and VP1(95.9%). The GPV/GD/ 3121/2024 strain exhibits a high whole⁃genome sequence similarity of 97.5% with recent GPV strains isolated in China,including the DY16,RC16,and HB⁃2019 strains. Phylogenetic analysis based on the complete genome,non⁃ structural protein NS1,and structural protein VP1 sequences consistently demonstrated that the isolate clustered within a major clade sharing close genetic relationships with European vaccine strain VG32/1)domestic vaccine strains(GDaGPV,SYG61v),and Taiwanese vaccine strain 82⁃0321V. Additionally,compared to classical GPV strains,GPV/GD/3121/2024 harbored three unique nucleotide mutations in the VP1 gene(A2496T,G2515C,and A2772G),resulting in amino acid substitutions V38L,S178T,and Y491H in the VP1 structural protein. This study confirmed that the lethal outbreak in juvenile geese was caused by GPV infection. The causative strain was successfully isolated and characterized through comprehensive genetic and evolutionary analyses. Furthermore,we summarized the current epidemiological status of GPV in China. These findings provide valuable reference data for understanding the biological characteristics of GPV and formulating scientific control strategies.

Key words: Goose Parvovirus, Complete gene, Genetic evolutionary analysis, Amino Acid Sequence Alignment

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